The detailed information of tRNA gene sequence


Sequence ID>WENV181406031
Genome IDOGCE01023897
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 315
End posion on genome 242
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aaaaatatca
tRNA gene sequence 
GGGCTGGTAGCTCAGCTGGCAGAGCAACGGACTCTTAATCCGTGGGTCGCGGGTTCGACT
CCCGCCCAGCCCACtt
Downstream region at tRNA end position 
ttcaaaatgg
Secondary structure (Cloverleaf model)
>WENV181406031	Lys	CTT
                   a      ACtt ttcaaaatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T C
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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