The detailed information of tRNA gene sequence


Sequence ID>WENV181406055
Genome IDOGCE01027484
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 533
End posion on genome 604
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatatttta
tRNA gene sequence 
GGGCCCGTAGTCTAGTGGTAGGATTCTGGCCTCGCTAGCCAGAGGTCCCGGGTTCAAATC
CCGGCGGGTCCAaaa
Downstream region at tRNA end position 
taaatattnn
Secondary structure (Cloverleaf model)
>WENV181406055	Ala	CGC
                   a      Aaaa taaatattnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     T C T G       C C G G G     C
      G     + | | +                 T T
      G     G G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       T
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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