The detailed information of tRNA gene sequence


Sequence ID>WENV181406063
Genome IDOGCE01029173
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 491
End posion on genome 402
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcttcgtta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCTTGCTAAGGAGTTGTAGGGTTTACAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatccgtttc
Secondary structure (Cloverleaf model)
>WENV181406063	Ser	GCT
                   a      Gttt aatccgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTTACAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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