The detailed information of tRNA gene sequence


Sequence ID>WENV181406346
Genome IDOGCG01000139
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 35501
End posion on genome 35426
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ataaagcgta
tRNA gene sequence 
GGGCCCGTAGTCTAGCCAGGACTAGGATGCGACGTTCGGGTCGTCGTGATCCCGGGTTCA
AATCCCGGCGGGCCCAtag
Downstream region at tRNA end position 
aaaaagtttt
Secondary structure (Cloverleaf model)
>WENV181406346	Pro	CGG
                   a      Atag aaaaagtttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A C T A        G     TGATC
                    C - G
                    G - C
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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