The detailed information of tRNA gene sequence


Sequence ID>WENV181406390
Genome IDOGCG01000199
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 22359
End posion on genome 22435
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccggcgtttc
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTCAGAGCAGGGGACTCATAATCCTTTGGTCGCGGGTTCAAA
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tataaaacag
Secondary structure (Cloverleaf model)
>WENV181406390	Ile2	CAT
                   c      ACCA tataaaacag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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