The detailed information of tRNA gene sequence


Sequence ID>WENV181406529
Genome IDOGCG01000397
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 26550
End posion on genome 26636
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcagcgac
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGCCCAAGGGGACGGGCTGGAGACCCGTTGCTCCACCAGGGGCG
CGTGGGTTCAAATCCCACCCCCGGCGCgt
Downstream region at tRNA end position 
ctagcgctta
Secondary structure (Cloverleaf model)
>WENV181406529	Ser	GGA
                   c      GCgt ctagcgctta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TGCTCCACCAGGGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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