The detailed information of tRNA gene sequence


Sequence ID>WENV181406602
Genome IDOGCG01000624
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 16180
End posion on genome 16094
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaagagcggt
tRNA gene sequence 
GCCGCGGTCGCCTAGCTGGCTAGGGCGCCGGCCTGCTAAGCCGGTGGGGGAAACCCCGCG
CGGGTTCAAATCCCGCCCGCGGCGCCA
Downstream region at tRNA end position 
cctcctctta
Secondary structure (Cloverleaf model)
>WENV181406602	Ser	GCT
                   t      GCCA cctcctctta
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    T       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      C T A        G     TGGGGGAAACCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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