The detailed information of tRNA gene sequence


Sequence ID>WENV181406816
Genome IDOGCG01001600
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 387
End posion on genome 310
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctcttagt
tRNA gene sequence 
GCCGCAGTAGTCTAGCCCGGTCCAGGATGAGGGCCTGTCGAGCCCTTGACCCGGGTTCAA
ATCCCGGCTGCGGCGCCA
Downstream region at tRNA end position 
ttcttttaca
Secondary structure (Cloverleaf model)
>WENV181406816	Asp	GTC
                   t      GCCA ttcttttaca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C C A        G     TGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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