The detailed information of tRNA gene sequence


Sequence ID>WENV181406911
Genome IDOGCG01002534
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 3993
End posion on genome 3901
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatattttaa
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTCGAAGGCGCACCGCTGGAAACGGTGTGAAGGGTGATGAGCT
CTTCCGCGGGTTCGAATCCCGCCCCATCCGCCA
Downstream region at tRNA end position 
ctaaacttta
Secondary structure (Cloverleaf model)
>WENV181406911	Ser	GGA
                   a      GCCA ctaaacttta
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAAGGGTGATGAGCTCTTCC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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