The detailed information of tRNA gene sequence


Sequence ID>WENV181407061
Genome IDOGCG01005074
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 3221
End posion on genome 3313
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgcgacac
tRNA gene sequence 
GGAGAGATGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGCTAAACACT
CCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gcatttcgag
Secondary structure (Cloverleaf model)
>WENV181407061	Ser	GCT
                   c      GCCA gcatttcgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGCTAAACACTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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