The detailed information of tRNA gene sequence


Sequence ID>WENV181407115
Genome IDOGCG01006663
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 2913
End posion on genome 2841
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggatttttc
tRNA gene sequence 
GGCGGTATAGCTCAGGGGCTAGAGCGGAGATCTCATAAGTCTTAGGTCGGAGGTTCGAAT
CCTCCTACCGCCAttt
Downstream region at tRNA end position 
atatatgttc
Secondary structure (Cloverleaf model)
>WENV181407115	Met	CAT
                   c      Attt atatatgttc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C C T C C     A
      G G A        A      | | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    C       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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