The detailed information of tRNA gene sequence


Sequence ID>WENV181407170
Genome IDOGCG01008569
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 964
End posion on genome 879
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttaatgat
tRNA gene sequence 
GCCGCGGTCGCCCAGCCCGGTAGGGCGTCGGCCTGCTAAGCCGATGGGGTTAATCCCCGC
GCGGGTTCAAATCCCGCCCGCGGCGCat
Downstream region at tRNA end position 
taaatattat
Secondary structure (Cloverleaf model)
>WENV181407170	Ser	GCT
                   t      GCat taaatattat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    C       C C C G       G C G G G     C
    C       | | | |                 T T
    G       G G G C
      G T A        G     TGGGGTTAATCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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