The detailed information of tRNA gene sequence


Sequence ID>WENV181407239
Genome IDOGCG01011543
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1894
End posion on genome 1819
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atattcatat
tRNA gene sequence 
GCCGCAGTAGTCTAGCCCGGTTTAGGATGAGGGCCTGTCGAGCCCTTGACCCGGGTTCAA
ATCCCGGCTGCGGCGCta
Downstream region at tRNA end position 
attttacgta
Secondary structure (Cloverleaf model)
>WENV181407239	Asp	GTC
                   t      GCta attttacgta
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T A        G     TGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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