The detailed information of tRNA gene sequence


Sequence ID>WENV181407323
Genome IDOGCG01017417
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1565
End posion on genome 1640
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttagaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAGT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
tatggggccc
Secondary structure (Cloverleaf model)
>WENV181407323	fMet	CAT
                   t      ACCA tatggggccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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