The detailed information of tRNA gene sequence


Sequence ID>WENV181407361
Genome IDOGCG01019675
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1443
End posion on genome 1372
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aattaacgta
tRNA gene sequence 
GGGCCTGTAGCTCAAAGGCAGAGCAGACGGCTCATAACCGTCCGGTTGGAGGTTCGAGTC
CTTCCAGGCCCAtgc
Downstream region at tRNA end position 
tttttctcat
Secondary structure (Cloverleaf model)
>WENV181407361	Ile2	CAT
                   a      Atgc tttttctcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T T C C     A
        A A        A      | + | | |     G
      A     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTT
                    G - C
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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