The detailed information of tRNA gene sequence


Sequence ID>WENV181407380
Genome IDOGCG01021334
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1204
End posion on genome 1293
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataatccta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCGGGTGATTTGAAATCACTTGTGGGTTGACGCCCA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaaatcctg
Secondary structure (Cloverleaf model)
>WENV181407380	Ser	TGA
                   a      GCCA taaaatcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGTGGGTTGACGCCCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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