The detailed information of tRNA gene sequence


Sequence ID>WENV181407463
Genome IDOGCG01029699
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1053
End posion on genome 978
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGTCCGTGGCGTAGTCAGGACCAGCGCGCCGGCCTTCGGAGCCGGAGGTCGGGGGTTCA
AATCCCCCCGGACCCGtgg
Downstream region at tRNA end position 
gccctgatcc
Secondary structure (Cloverleaf model)
>WENV181407463	Arg	TCG
                   n      Gtgg gccctgatcc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C T G A        G      | | | | |     A
  A         T G C G       G G G G G     C
  G         + | | |                 T T
  G         G C G C
    A C C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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