The detailed information of tRNA gene sequence


Sequence ID>WENV181407549
Genome IDOGCG01040354
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 552
End posion on genome 626
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaatcttat
tRNA gene sequence 
TGCGAGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCTCGCAACtt
Downstream region at tRNA end position 
aacttttgat
Secondary structure (Cloverleaf model)
>WENV181407549	fMet	CAT
                   t      ACtt aacttttgat
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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