The detailed information of tRNA gene sequence


Sequence ID>WENV181407582
Genome IDOGCG01044259
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 96
End posion on genome 5
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttaggtaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGCGCCCTGCTAAGGCGTTGTACGGTTAAAGCCG
TACCGCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tattnnnnnn
Secondary structure (Cloverleaf model)
>WENV181407582	Ser	GCT
                   a      GCCA tattnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACGGTTAAAGCCGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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