The detailed information of tRNA gene sequence


Sequence ID>WENV181407598
Genome IDOGCG01048348
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 329
End posion on genome 405
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgcgcggga
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGCTGGGGGTTCGAG
ACCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ggcgcggcct
Secondary structure (Cloverleaf model)
>WENV181407598	Trp	CCA
                   a      GCCA ggcgcggcct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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