The detailed information of tRNA gene sequence


Sequence ID>WENV181407656
Genome IDOGCH01000002
Search identical group
Phylum/Class[OGCH] hot springs metagenome; hot springs
Species
Start position on genome 307
End posion on genome 231
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ccattgtgat
tRNA gene sequence 
CGCGGGGTAGAGCAGCCAGGTAGCTCACCGGGCTCATAACCCGGAGGTCGAGGGTTCAAA
TCCCTCCCCCGCAACCA
Downstream region at tRNA end position 
attgggccca
Secondary structure (Cloverleaf model)
>WENV181407656	fMet	CAT
                   t      ACCA attgggccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       C G A G       G A G G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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