The detailed information of tRNA gene sequence


Sequence ID>WENV181407820
Genome IDOGCH01000096
Search identical group
Phylum/Class[OGCH] hot springs metagenome; hot springs
Species
Start position on genome 2995
End posion on genome 2904
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatgtagac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGACGAAGGCGCTCGCCTGGAGAGCGAGTAGACCGCGAAAGCGG
TCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tgtttttata
Secondary structure (Cloverleaf model)
>WENV181407820	Ser	GGA
                   c      GCCA tgtttttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    A       A G G C
      C G A        G     TAGACCGCGAAAGCGGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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