The detailed information of tRNA gene sequence


Sequence ID>WENV181408182
Genome IDOGCH01000905
Search identical group
Phylum/Class[OGCH] hot springs metagenome; hot springs
Species
Start position on genome 260
End posion on genome 336
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatagggt
tRNA gene sequence 
AGGCCAGTAGCTCAACTTGGCAGAGCGTCGGACTCCAAATCCGAAGGCTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atttttattt
Secondary structure (Cloverleaf model)
>WENV181408182	Trp	CCA
                   t      GCCA atttttattt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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