The detailed information of tRNA gene sequence


Sequence ID>WENV181408297
Genome IDOGCH01001536
Search identical group
Phylum/Class[OGCH] hot springs metagenome; hot springs
Species
Start position on genome 744
End posion on genome 836
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggataaaaa
tRNA gene sequence 
GGAGGCGTGAGGGGGCTGGTGCCTCTCCCGGGCTTCAAACCCGGTGCACCCCCAAAAGGG
GTGGGTGGGTTCAATTCCCATACGCCTCCGCCA
Downstream region at tRNA end position 
ccttaatttt
Secondary structure (Cloverleaf model)
>WENV181408297	SeC	TCA
                   a      GCCA ccttaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T A C C C     A
      T C G        A      + | | | |     A
    G       G G G G       G T G G G     C
    G       | + | +                 T T
    T       C T C T
      G C          C     TGCACCCCCAAAAGGGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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