The detailed information of tRNA gene sequence


Sequence ID>WENV181409162
Genome IDOGCI01000019
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 185412
End posion on genome 185498
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggttgcgtgc
tRNA gene sequence 
GGAGGGCTGGCCGAGCGGTCTAAGGCGGCTGACTTGAAATCAGTTGTGGCACTGCCACCG
CGGGTTCGAATCCTGCGCCCTCCGCCA
Downstream region at tRNA end position 
aatccgccta
Secondary structure (Cloverleaf model)
>WENV181409162	Ser	TGA
                   c      GCCA aatccgccta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C G T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTGGCACTGCCACC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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