The detailed information of tRNA gene sequence


Sequence ID>WENV181409164
Genome IDOGCI01000019
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 60582
End posion on genome 60490
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcccggagc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttgctttagt
Secondary structure (Cloverleaf model)
>WENV181409164	Ser	CGA
                   c      GCCA ttgctttagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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