The detailed information of tRNA gene sequence


Sequence ID>WENV181409358
Genome IDOGCI01000124
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 56531
End posion on genome 56437
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggttcaaccc
tRNA gene sequence 
GGAGGTGAGTCGTAGCTGGTGCTGCGCCCAGGCTTCAAACCTGGTGGGGGTCGGTAGCCG
GTCCCGGTGGGTTCGATTCCCACGCGCCTCCGCCA
Downstream region at tRNA end position 
gaggagatag
Secondary structure (Cloverleaf model)
>WENV181409358	SeC	TCA
                   c      GCCA gaggagatag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A   G          T T
                    G     C A C C C     A
      T C G        T      | | | | |     G
    G       A T G C       G T G G G     C
    G       | + | |                 T T
    T       T G C G
      G C          C     TGGGGGTCGGTAGCCGGTCCCG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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