The detailed information of tRNA gene sequence


Sequence ID>WENV181410137
Genome IDOGCI01001499
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 11292
End posion on genome 11377
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcctgctgc
tRNA gene sequence 
GGAGGGGTAGCATAATTGGTAATGCAGCGGTCTTGAAAACCGCCGCCCGCAAGGGCTTGC
AGGTTCGAGTCCTGTCCCCTCCGCCA
Downstream region at tRNA end position 
caaactccct
Secondary structure (Cloverleaf model)
>WENV181410137	Ser	TGA
                   c      GCCA caaactccct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       T A C G       G C A G G     C
    G       | | | |                 T T
    G       A T G C
      T A          A     CGCCCGCAAGGGCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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