The detailed information of tRNA gene sequence


Sequence ID>WENV181410588
Genome IDOGCI01004061
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 4402
End posion on genome 4328
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggccgagcgc
tRNA gene sequence 
AGGGGCGTAGGTTGAACGGTAGACCAGCGGTCTCCAAAACCGCGAGTGGGGGTTCGAATC
CCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gcgtcccatt
Secondary structure (Cloverleaf model)
>WENV181410588	Trp	CCA
                   c      GCCA gcgtcccatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A G        A      | + | | |     G
    C       T T G G       G G G G G     C
    G       + | | |                 T T
    G       G A C C
      T A          A     GAGT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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