The detailed information of tRNA gene sequence


Sequence ID>WENV181412230
Genome IDOGCI01101528
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 432
End posion on genome 516
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgtaacaa
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAGGCGCAGCACTGGAAATGCTGTGTGGGGCAACTCACC
GAGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position 
ttcgttcaat
Secondary structure (Cloverleaf model)
>WENV181412230	Ser	GGA
                   a      Gttt ttcgttcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      C G A        G     TGTGGGGCAACTCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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