The detailed information of tRNA gene sequence


Sequence ID>WENV181412263
Genome IDOGCI01109611
Search identical group
Phylum/Class[OGCI] hot springs metagenome; Hot spring water
Species
Start position on genome 484
End posion on genome 393
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctcctaaaa
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGATAGGCAGGTAACT
CCTATCCGAGGGTTCGAATCCCTCTCTCTCCGtta
Downstream region at tRNA end position 
tcacccgtta
Secondary structure (Cloverleaf model)
>WENV181412263	Ser	GCT
                   a      Gtta tcacccgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATAGGCAGGTAACTCCTATCC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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