The detailed information of tRNA gene sequence


Sequence ID>W141139457
Genome IDAWNO01000071
Search identical group
Phylum/ClassUnclassified
SpeciesMarinimicrobia bacterium JGI OTU-1 [AWNO]
Start position on genome 1828
End posion on genome 1903
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggctgcgca
tRNA gene sequence 
GGGCCTATAGCTCAACGGTTAGAGCAGGGGACTCATAATCCCTTGGTTCCAGGTTCGAAT
CCTGGTGGGCCCACCA
Downstream region at tRNA end position 
actcatccag
Secondary structure (Cloverleaf model)
>W141139457	Met	CAT
                   a      ACCA actcatccag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G T C C     A
      C A A        A      | | | | |     G
    G       C T C G       C C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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