The detailed information of tRNA gene sequence


Sequence ID>W141139592
Genome IDAWNV01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aminicenans sakinawicola sakinawicola JGI OTU-1 [AWNV]
Start position on genome 55890
End posion on genome 55965
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tatcatctgt
tRNA gene sequence 
GCCCCTGTCGTCTAGCCTGGTCTAGGACATCGCCCTTTCAAGGCGGCAACACGGGTTCAA
ATCCCGTCGGGGGCGCtc
Downstream region at tRNA end position 
ccttctgtat
Secondary structure (Cloverleaf model)
>W141139592	Glu	TTC
                   t      GCtc ccttctgtat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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