The detailed information of tRNA gene sequence


Sequence ID>W141139639
Genome IDAWNW01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Hydrogenedens terephthalicus terephthalicus JGI OTU-1 [AWNW]
Start position on genome 12563
End posion on genome 12650
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctacaacgat
tRNA gene sequence 
GCCGGGATGGCGAAATTGGCAGACGCATCGGACTCAAAATCCGACGAGGCTTAACCCCTC
GTGAGGGTTCGACTCCCTCTCCCGGCACtt
Downstream region at tRNA end position 
ttccttctat
Secondary structure (Cloverleaf model)
>W141139639	Leu	CAA
                   t      ACtt ttccttctat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGAGGCTTAACCCCTCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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