The detailed information of tRNA gene sequence


Sequence ID>WENV181416162
Genome IDOGCL01057766
Search identical group
Phylum/Class[OGCL] hot springs metagenome; Hot spring water
Species
Start position on genome 1052
End posion on genome 977
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCGGTAGCTCAATGGTTAGAGCTCGCTGCTCATAACAGCGCCGGTGCCGGTTCGAGT
CCGGCCCGGCCCACCA
Downstream region at tRNA end position 
tgcctctccc
Secondary structure (Cloverleaf model)
>WENV181416162	Ile2	CAT
                   n      ACCA tgcctctccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CCGGT
                    C - G
                    G - C
                    C - G
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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