The detailed information of tRNA gene sequence


Sequence ID>W141146563
Genome IDAWVR01000090
Search identical group
Phylum/ClassFusobacteriota
SpeciesLeptotrichia sp. oral taxon 215 oral taxon 215 str. W9775 [AWVR]
Start position on genome 48071
End posion on genome 48167
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atattggaat
tRNA gene sequence 
GGGAGTGGATGAGTTCTGGTGTTCTCTCCGGTCTTCAAAACCGGCGTGAGGGGTTAGGAG
CCTCTCAGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
gtataataag
Secondary structure (Cloverleaf model)
>W141146563	SeC(p)	TCA
                   t      GCCA gtataataag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G A G       G T G G G     C
    G         | | |                 T T
    T       T C T C
      G T          T     CGTGAGGGGTTAGGAGCCTCTCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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