The detailed information of tRNA gene sequence


Sequence ID>W141147499
Genome IDAWXA01000015
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera vaginalis (ex Srinivasan et al. 2021) BV3C16-1 [AWXA]
Start position on genome 18457
End posion on genome 18381
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agtcaggtaa
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCGCTTGGTTCGGGACTAAGAGGTCGCAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
tactttacac
Secondary structure (Cloverleaf model)
>W141147499	Pro	CGG
                   a      ACCA tactttacac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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