The detailed information of tRNA gene sequence


Sequence ID>W141149838
Genome IDAWZW01000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC9022 [AWZW]
Start position on genome 380335
End posion on genome 380411
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaattattt
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGCAGGACTCATAAGCCTGAGGTCAGTGGTTCGAT
CCCACTTCCCGCTACCA
Downstream region at tRNA end position 
taaactaagc
Secondary structure (Cloverleaf model)
>W141149838	Met	CAT
                   t      ACCA taaactaagc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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