The detailed information of tRNA gene sequence


Sequence ID>W141149853
Genome IDAWZW01000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC9022 [AWZW]
Start position on genome 528430
End posion on genome 528356
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accactcaat
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACAGCTGGTTTTCATCCTGCAAAGGGGGGTTCGATTC
CCCCAGGGACCGCCA
Downstream region at tRNA end position 
tttatgtcat
Secondary structure (Cloverleaf model)
>W141149853	Glu	TTC
                   t      GCCA tttatgtcat
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    G - C
                    C - G
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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