The detailed information of tRNA gene sequence


Sequence ID>W08009320
Genome IDABOX01000005
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 144562
End posion on genome 144638
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aagaatggtt
tRNA gene sequence 
CGGGACGTAGCGTAGCTTGGTAGCGCGTCTGAATGGGGTTCAGAAGGTCGTGAGTTCAAA
TCTCACCGTCCCGACCA
Downstream region at tRNA end position 
ttgaattttt
Secondary structure (Cloverleaf model)
>W08009320	Pro	GGG
                   t      ACCA ttgaattttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        A      | | | | |     A
    T       T G C G       G T G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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