The detailed information of tRNA gene sequence


Sequence ID>W08011178
Genome IDABSI01000012
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobiae bacterium DG1235 [ABSI]
Start position on genome 228648
End posion on genome 228724
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtccttttta
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCCTGGTTTGGGACCAGGAGGTCGAAGGTTCGAA
TCCTTTCACCCCGACCA
Downstream region at tRNA end position 
ttttcgaaaa
Secondary structure (Cloverleaf model)
>W08011178	Pro	TGG
                   a      ACCA ttttcgaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G A A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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