The detailed information of tRNA gene sequence


Sequence ID>W141164521
Genome IDAXSA02000022
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis STO1-CHOC-0016 [AXSA]
Start position on genome 100382
End posion on genome 100458
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcgttcttt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGAGTTCGAA
TCCCGCCGTCCCGACCA
Downstream region at tRNA end position 
gtagttccaa
Secondary structure (Cloverleaf model)
>W141164521	Pro	GGG
                   t      ACCA gtagttccaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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