The detailed information of tRNA gene sequence


Sequence ID>W08001865
Genome IDABEA01000018
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesGeminisphaera colitermitum TAV2 [ABEA]
Start position on genome 19682
End posion on genome 19773
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctccacttcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGATAGCGGCGCTTTGCTAAAGCGTTGTAGGTGTAACAGCC
TACCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttacgata
Secondary structure (Cloverleaf model)
>W08001865	Ser	GCT
                   c      GCCA gtttacgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        G     TGTAGGTGTAACAGCCTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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