The detailed information of tRNA gene sequence


Sequence ID>W08001879
Genome IDABEA01000099
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesGeminisphaera colitermitum TAV2 [ABEA]
Start position on genome 11184
End posion on genome 11273
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caagcaacct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGCGCGCTTGGAAAGCGCGTGTAGGTGAAAGCCTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcttacaacg
Secondary structure (Cloverleaf model)
>W08001879	Ser	GGA
                   t      GCCA gcttacaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTAGGTGAAAGCCTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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