The detailed information of tRNA gene sequence


Sequence ID>W08002803
Genome IDABFK02000020
Search identical group
Phylum/ClassBacteroidota
SpeciesAlistipes putredinis DSM 17216 [ABFK]
Start position on genome 100682
End posion on genome 100592
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagagggttt
tRNA gene sequence 
GGAGAGTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACGGGATTACTGT
ACCGGGGGTTCGAATCCCCCACTCTCCGCAA
Downstream region at tRNA end position 
attaagattt
Secondary structure (Cloverleaf model)
>W08002803	Ser	GCT
                   t      GCAA attaagattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGATTACTGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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