The detailed information of tRNA gene sequence


Sequence ID>W08003855
Genome IDABGO01000016
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGemmata obscuriglobus UQM 2246 [ABGO]
Start position on genome 18178
End posion on genome 18265
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catcccacct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGTGCAGCACTGGAAATGCTGTGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
gaaaagagcc
Secondary structure (Cloverleaf model)
>W08003855	Ser	GGA
                   t      GCtc gaaaagagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    T       T T G T
      C G A        G     TGTACGGGAAACCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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