The detailed information of tRNA gene sequence


Sequence ID>W08004299
Genome IDABHI01000003
Search identical group
Phylum/ClassBacteroidota
SpeciesFlavobacteriales bacterium ALC-1 [ABHI]
Start position on genome 394578
End posion on genome 394487
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttattact
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAGCGGTTTGCTAAATCGTCGTAGGTGGAAACACT
TACCCAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
attttactat
Secondary structure (Cloverleaf model)
>W08004299	Ser	GCT
                   t      GCAA attttactat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTAGGTGGAAACACTTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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