The detailed information of tRNA gene sequence


Sequence ID>W08004321
Genome IDABHJ01000002
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga sp. 128-5-R1-1 [ABHJ]
Start position on genome 106214
End posion on genome 106305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaagactca
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCCTAAGGCGGCGCCCTGCTAAGGCGTTGGGCGGGTCCTCCCG
CTCCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaaaggagg
Secondary structure (Cloverleaf model)
>W08004321	Ser	GCT
                   a      GCCA taaaaggagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C T A        G     TGGGCGGGTCCTCCCGCTCC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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