The detailed information of tRNA gene sequence


Sequence ID>W08004327
Genome IDABHJ01000003
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga sp. 128-5-R1-1 [ABHJ]
Start position on genome 112239
End posion on genome 112152
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgcaggct
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGAAATCCCTTGAGGGTTCGCAGCCC
TCCGTGGGTTCGAATCCCACCCCCTCCGcca
Downstream region at tRNA end position 
gacaaagctc
Secondary structure (Cloverleaf model)
>W08004327	Ser	TGA
                   t      Gcca gacaaagctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGAGGGTTCGCAGCCCTCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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