The detailed information of tRNA gene sequence


Sequence ID>W141170131
Genome IDAXXE01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. JGI 0001011-P21 [AXXE]
Start position on genome 42787
End posion on genome 42714
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tgcccccgat
tRNA gene sequence 
GCGGGAGTAGTTCAATGGTAGAACCCCAGCCTTCCAAGCTGATGACGCGGGTTCGATTCC
CGTCTCCCGCTCCA
Downstream region at tRNA end position 
gagacccggt
Secondary structure (Cloverleaf model)
>W141170131	Gly	TCC
                   t      TCCA gagacccggt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TGAC
                    C   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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